BamTools::CigarOp Struct Reference

Represents a CIGAR alignment operation. More...

#include <BamAux.h>

Public Member Functions
	CigarOp (const char type='\0', const uint32_t &length=0)
	constructor

Public Attributes
char	Type
	CIGAR operation type (MIDNSHPX=).
uint32_t	Length
	CIGAR operation length (number of bases).

Detailed Description

Represents a CIGAR alignment operation.

See also

http://samtools.sourceforge.net/SAM1.pdf for more details on using CIGAR operations.

Constructor & Destructor Documentation

CigarOp()

BamTools::CigarOp::CigarOp ( const char type = '\0', const uint32_t & length = 0 )

inline

constructor

Member Data Documentation

Length

uint32_t BamTools::CigarOp::Length

CIGAR operation length (number of bases).

Type

char BamTools::CigarOp::Type

CIGAR operation type (MIDNSHPX=).

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The documentation for this struct was generated from the following file:

• BamAux.h